Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 MIR662-201ENST00000384847 95 ntBASIC21.68■■□□□ 1.06
RNF41Q9H4P4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 SPDYE13P-201ENST00000445314 798 ntBASIC21.68■■□□□ 1.06
RNF41Q9H4P4 AC024563.2-201ENST00000603282 481 ntBASIC21.68■■□□□ 1.06
RNF41Q9H4P4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 GMCL1P1-201ENST00000463439 1581 ntBASIC21.67■■□□□ 1.06
RNF41Q9H4P4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 VENTXP5-201ENST00000523979 775 ntBASIC21.67■■□□□ 1.06
RNF41Q9H4P4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 AC099343.3-201ENST00000605834 2503 ntBASIC21.67■■□□□ 1.06
RNF41Q9H4P4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF41Q9H4P4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 KRT89P-201ENST00000620027 1478 ntBASIC21.66■■□□□ 1.06
RNF41Q9H4P4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF41Q9H4P4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 AL024508.2-201ENST00000607749 1894 ntBASIC21.65■■□□□ 1.06
RNF41Q9H4P4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 KRT18P48-201ENST00000434763 852 ntBASIC21.65■■□□□ 1.06
RNF41Q9H4P4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 FAM86EP-206ENST00000510506 987 ntBASIC21.65■■□□□ 1.06
RNF41Q9H4P4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF41Q9H4P4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF41Q9H4P4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms