Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 AC124864.1-201ENST00000623408 392 ntBASIC19.84■□□□□ 0.77
NXF3Q9H4D5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
NXF3Q9H4D5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 LINC00167-201ENST00000530583 1419 ntBASIC19.83■□□□□ 0.76
NXF3Q9H4D5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 AL031598.1-201ENST00000561511 1773 ntBASIC19.83■□□□□ 0.76
NXF3Q9H4D5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.83■□□□□ 0.76
NXF3Q9H4D5 AC233702.3-201ENST00000578656 1387 ntBASIC19.83■□□□□ 0.76
NXF3Q9H4D5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 GUSBP12-201ENST00000513727 720 ntBASIC19.82■□□□□ 0.76
NXF3Q9H4D5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 AC012615.1-201ENST00000565797 1299 ntBASIC19.82■□□□□ 0.76
NXF3Q9H4D5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.82■□□□□ 0.76
NXF3Q9H4D5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 AL845331.1-201ENST00000424978 1190 ntBASIC19.81■□□□□ 0.76
NXF3Q9H4D5 NUS1P1-201ENST00000446295 882 ntBASIC19.81■□□□□ 0.76
NXF3Q9H4D5 AC091607.1-201ENST00000490318 1060 ntBASIC19.81■□□□□ 0.76
NXF3Q9H4D5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 AP005901.3-202ENST00000581653 237 ntBASIC19.81■□□□□ 0.76
NXF3Q9H4D5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 AL691432.3-201ENST00000621860 400 ntBASIC19.81■□□□□ 0.76
NXF3Q9H4D5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NXF3Q9H4D5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms