Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 AC068418.2-201ENST00000577309 3703 ntBASIC17.55■□□□□ 0.4
VCX3BQ9H321 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 PP12613-201ENST00000424958 2230 ntBASIC17.55■□□□□ 0.4
VCX3BQ9H321 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 AC112777.1-201ENST00000540175 1423 ntBASIC17.55■□□□□ 0.4
VCX3BQ9H321 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 AC131281.2-201ENST00000520478 145 ntBASIC17.54■□□□□ 0.4
VCX3BQ9H321 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VCX3BQ9H321 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.54■□□□□ 0.4
VCX3BQ9H321 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 AL499627.1-201ENST00000569373 2188 ntBASIC17.53■□□□□ 0.4
VCX3BQ9H321 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 KRT18P68-201ENST00000392293 1000 ntBASIC17.53■□□□□ 0.4
VCX3BQ9H321 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCX3BQ9H321 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.53■□□□□ 0.4
VCX3BQ9H321 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 AC068587.6-202ENST00000641839 5619 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms