Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 MESTP1-201ENST00000404287 994 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 DGCR10-201ENST00000609839 495 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 AC073648.6-201ENST00000641589 218 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 GPAT2P1-201ENST00000444924 1672 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 AC006116.8-202ENST00000587620 1550 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MIR149-201ENST00000384879 89 ntBASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 KRT18P55-202ENST00000578578 1546 ntBASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 AC093010.1-201ENST00000473625 1624 ntBASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 SDHAP2-201ENST00000455183 2001 ntBASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 MIR3180-5-201ENST00000583743 153 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms