Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 MESTP1-201ENST00000404287 994 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 DGCR10-201ENST00000609839 495 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 AC073648.6-201ENST00000641589 218 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 GPAT2P1-201ENST00000444924 1672 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 AC006116.8-202ENST00000587620 1550 ntBASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MIR149-201ENST00000384879 89 ntBASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHACTR1Q9C0D0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 KRT18P55-202ENST00000578578 1546 ntBASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 AC093010.1-201ENST00000473625 1624 ntBASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 SDHAP2-201ENST00000455183 2001 ntBASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHACTR1Q9C0D0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 MIR3180-5-201ENST00000583743 153 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms