Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM2Q9C040 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM2Q9C040 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 FAM210CP-201ENST00000445714 574 ntBASIC16.96■□□□□ 0.31
TRIM2Q9C040 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 AC097493.4-201ENST00000641197 219 ntBASIC16.96■□□□□ 0.31
TRIM2Q9C040 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM2Q9C040 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM2Q9C040 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM2Q9C040 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM2Q9C040 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM2Q9C040 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM2Q9C040 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM2Q9C040 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM2Q9C040 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM2Q9C040 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
TRIM2Q9C040 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM2Q9C040 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.96■□□□□ 0.3
TRIM2Q9C040 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM2Q9C040 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SLC25A1P2-201ENST00000430693 912 ntBASIC16.95■□□□□ 0.3
TRIM2Q9C040 TSPY17P-201ENST00000450329 467 ntBASIC16.95■□□□□ 0.3
TRIM2Q9C040 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 AC012306.2-201ENST00000609350 630 ntBASIC16.95■□□□□ 0.3
TRIM2Q9C040 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM2Q9C040 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM2Q9C040 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM2Q9C040 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM2Q9C040 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM2Q9C040 MMP23A-201ENST00000234610 1017 ntBASIC16.94■□□□□ 0.3
TRIM2Q9C040 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 RBM17P1-201ENST00000453646 1190 ntBASIC16.94■□□□□ 0.3
TRIM2Q9C040 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM2Q9C040 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRIM2Q9C040 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM2Q9C040 AC007613.1-201ENST00000572811 2597 ntBASIC16.94■□□□□ 0.3
TRIM2Q9C040 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms