Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NPM1P29-201ENST00000483112 803 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 CFI-204ENST00000510800 667 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC060814.1-201ENST00000554326 538 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AL136141.1-201ENST00000605780 369 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC004241.4-201ENST00000622792 1120 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC016717.3-201ENST00000624730 554 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KRTAP3-3Q9BYR6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 CCDC190-201ENST00000367910 1498 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 SMPD5-203ENST00000639008 1464 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 Z82209.2-201ENST00000623410 2012 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AL035456.1-201ENST00000456064 1369 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 Y_RNA.162-201ENST00000363683 102 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC104457.1-201ENST00000401024 814 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 RNU2-41P-201ENST00000410991 178 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 VN1R36P-201ENST00000414936 291 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 CR848007.2-201ENST00000424918 787 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 MGAT2P2-201ENST00000427194 797 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC023271.1-201ENST00000445936 1090 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AP006437.1-202ENST00000530327 933 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC136619.2-201ENST00000563361 631 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 RAB11A-203ENST00000564910 978 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC016575.1-201ENST00000607026 382 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC015802.5-201ENST00000607478 399 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AL358472.3-201ENST00000608147 415 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC007671.1-201ENST00000616957 830 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC019278.1-201ENST00000623516 479 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 NFE2L3P1-201ENST00000588207 1959 ntBASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KRTAP3-3Q9BYR6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AL445989.1-201ENST00000611641 1436 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AL080317.2-201ENST00000607386 1385 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms