Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC3Q9BY71 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC3Q9BY71 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC3Q9BY71 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.18■□□□□ 0.66
LRRC3Q9BY71 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC3Q9BY71 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC3Q9BY71 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRRC3Q9BY71 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 AC009078.2-202ENST00000463353 338 ntBASIC19.17■□□□□ 0.66
LRRC3Q9BY71 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 AC099336.1-202ENST00000602961 463 ntBASIC19.17■□□□□ 0.66
LRRC3Q9BY71 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC3Q9BY71 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 MIR149-201ENST00000384879 89 ntBASIC19.16■□□□□ 0.66
LRRC3Q9BY71 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 AC138894.3-201ENST00000603787 634 ntBASIC19.16■□□□□ 0.66
LRRC3Q9BY71 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC3Q9BY71 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 NSUN5P1-202ENST00000421140 1535 ntBASIC19.15■□□□□ 0.66
LRRC3Q9BY71 NSUN5P2-203ENST00000457352 1529 ntBASIC19.15■□□□□ 0.66
LRRC3Q9BY71 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 AL160237.2-201ENST00000556165 472 ntBASIC19.15■□□□□ 0.66
LRRC3Q9BY71 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 AC098818.2-201ENST00000564925 2320 ntBASIC19.15■□□□□ 0.66
LRRC3Q9BY71 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LRRC3Q9BY71 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.66
LRRC3Q9BY71 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC3Q9BY71 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms