Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 B3GAT3P1-201ENST00000471720 806 ntBASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 AL133373.2-201ENST00000623187 2828 ntBASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRDL1Q9BU40 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.65□□□□□ -0.07
CHRDL1Q9BU40 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 RPS2P55-201ENST00000397318 883 ntBASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 FAM207BP-201ENST00000447172 505 ntBASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 AC107956.1-201ENST00000494359 873 ntBASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRDL1Q9BU40 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 MESTP1-201ENST00000404287 994 ntBASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 FSCN1P1-201ENST00000568912 1481 ntBASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms