Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 AC134043.2-201ENST00000624206 2238 ntBASIC18.42■□□□□ 0.54
CPNE1Q99829 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.42■□□□□ 0.54
CPNE1Q99829 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.42■□□□□ 0.54
CPNE1Q99829 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.42■□□□□ 0.54
CPNE1Q99829 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CPNE1Q99829 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE1Q99829 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE1Q99829 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CPNE1Q99829 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CPNE1Q99829 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CPNE1Q99829 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE1Q99829 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CPNE1Q99829 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CPNE1Q99829 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.41■□□□□ 0.54
CPNE1Q99829 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE1Q99829 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE1Q99829 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.41■□□□□ 0.54
CPNE1Q99829 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE1Q99829 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CPNE1Q99829 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CPNE1Q99829 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CPNE1Q99829 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CPNE1Q99829 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CPNE1Q99829 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CPNE1Q99829 RPS2P55-201ENST00000397318 883 ntBASIC18.4■□□□□ 0.54
CPNE1Q99829 AC107956.1-201ENST00000494359 873 ntBASIC18.4■□□□□ 0.54
CPNE1Q99829 AP001412.1-201ENST00000608405 714 ntBASIC18.4■□□□□ 0.54
CPNE1Q99829 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CPNE1Q99829 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPNE1Q99829 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE1Q99829 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE1Q99829 PHGDH-209ENST00000641074 1780 ntBASIC18.4■□□□□ 0.54
CPNE1Q99829 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE1Q99829 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE1Q99829 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE1Q99829 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.39■□□□□ 0.54
CPNE1Q99829 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE1Q99829 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 ABHD17AP1-201ENST00000358206 933 ntBASIC18.39■□□□□ 0.53
CPNE1Q99829 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPNE1Q99829 AC142381.4-202ENST00000563973 229 ntBASIC18.39■□□□□ 0.53
CPNE1Q99829 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms