Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDCA3Q99618 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDCA3Q99618 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDCA3Q99618 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA3Q99618 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA3Q99618 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDCA3Q99618 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA3Q99618 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.1■□□□□ 0.65
CDCA3Q99618 RPSAP43-201ENST00000402237 625 ntBASIC19.1■□□□□ 0.65
CDCA3Q99618 GPX1P2-201ENST00000429271 606 ntBASIC19.1■□□□□ 0.65
CDCA3Q99618 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.1■□□□□ 0.65
CDCA3Q99618 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA3Q99618 RNA5SP415-201ENST00000517246 115 ntBASIC19.1■□□□□ 0.65
CDCA3Q99618 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA3Q99618 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA3Q99618 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA3Q99618 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA3Q99618 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.09■□□□□ 0.65
CDCA3Q99618 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA3Q99618 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA3Q99618 AC025062.2-201ENST00000605477 670 ntBASIC19.09■□□□□ 0.65
CDCA3Q99618 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDCA3Q99618 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDCA3Q99618 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.09■□□□□ 0.65
CDCA3Q99618 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA3Q99618 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA3Q99618 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.08■□□□□ 0.65
CDCA3Q99618 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA3Q99618 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCA3Q99618 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 AP001160.2-201ENST00000596071 487 ntBASIC19.08■□□□□ 0.64
CDCA3Q99618 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA3Q99618 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA3Q99618 AL024508.2-201ENST00000607749 1894 ntBASIC19.07■□□□□ 0.64
CDCA3Q99618 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA3Q99618 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDCA3Q99618 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA3Q99618 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 YBX2P1-201ENST00000394192 760 ntBASIC19.07■□□□□ 0.64
CDCA3Q99618 PMS2P2-201ENST00000425039 1128 ntBASIC19.07■□□□□ 0.64
CDCA3Q99618 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms