Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRGV9Q99603 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TRGV9Q99603 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRGV9Q99603 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRGV9Q99603 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.38□□□□□ -0.11
TRGV9Q99603 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.38□□□□□ -0.11
TRGV9Q99603 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV9Q99603 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV9Q99603 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TRGV9Q99603 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.38□□□□□ -0.11
TRGV9Q99603 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TRGV9Q99603 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV9Q99603 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV9Q99603 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRGV9Q99603 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 AC096733.2-201ENST00000609937 1394 ntBASIC14.37□□□□□ -0.11
TRGV9Q99603 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV9Q99603 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.37□□□□□ -0.11
TRGV9Q99603 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.37□□□□□ -0.11
TRGV9Q99603 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 AC128676.1-201ENST00000454392 318 ntBASIC14.37□□□□□ -0.11
TRGV9Q99603 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.37□□□□□ -0.11
TRGV9Q99603 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.37□□□□□ -0.11
TRGV9Q99603 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
TRGV9Q99603 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.37□□□□□ -0.11
TRGV9Q99603 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRGV9Q99603 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV9Q99603 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 KRT8P50-201ENST00000562022 1438 ntBASIC14.36□□□□□ -0.11
TRGV9Q99603 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 RPPH1-201ENST00000516869 333 ntBASIC14.36□□□□□ -0.11
TRGV9Q99603 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV9Q99603 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV9Q99603 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV9Q99603 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV9Q99603 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRGV9Q99603 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV9Q99603 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms