Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 GUSBP6-202ENST00000438529 1198 ntBASIC14.95□□□□□ -0.02
RAB40CQ96S21 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 AC092118.2-201ENST00000613495 667 ntBASIC14.95□□□□□ -0.02
RAB40CQ96S21 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 AL645608.8-201ENST00000606034 2086 ntBASIC14.94□□□□□ -0.02
RAB40CQ96S21 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 C1QL1P1-201ENST00000568105 661 ntBASIC14.94□□□□□ -0.02
RAB40CQ96S21 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40CQ96S21 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40CQ96S21 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.93□□□□□ -0.02
RAB40CQ96S21 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 AC091874.3-201ENST00000512672 1195 ntBASIC14.93□□□□□ -0.02
RAB40CQ96S21 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAB40CQ96S21 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40CQ96S21 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms