Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.98■□□□□ 0.15
HIST1H2AAQ96QV6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 AC104581.1-202ENST00000635932 2618 ntBASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 TSPY7P-201ENST00000431358 1114 ntBASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 AP005242.2-201ENST00000580065 1175 ntBASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2AAQ96QV6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 AC073592.3-201ENST00000625118 1834 ntBASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 CCR12P-201ENST00000446203 998 ntBASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2AAQ96QV6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 AC079598.2-202ENST00000546624 1451 ntBASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.96■□□□□ 0.14
HIST1H2AAQ96QV6 AC008556.1-201ENST00000610908 2040 ntBASIC15.95■□□□□ 0.14
HIST1H2AAQ96QV6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms