Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 AC004817.3-201ENST00000602957 2129 ntBASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 AC011840.4-201ENST00000578471 627 ntBASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 MTDHP3-201ENST00000594186 672 ntBASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 RBM17P3-201ENST00000417687 1192 ntBASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 AP005117.1-201ENST00000584346 1413 ntBASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD1Q96PZ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 KRT8P3-201ENST00000519669 1449 ntBASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 AC007967.2-201ENST00000432613 625 ntBASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 AP002472.1-201ENST00000577490 586 ntBASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 AC009947.1-201ENST00000444350 727 ntBASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD1Q96PZ7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 MCCD1P2-201ENST00000423228 335 ntBASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 GUSBP12-201ENST00000513727 720 ntBASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 AC254562.1-201ENST00000417586 456 ntBASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms