Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 MIR3180-4-201ENST00000582223 153 ntBASIC21.8■■□□□ 1.08
NEK1Q96PY6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 AC010240.3-201ENST00000607688 395 ntBASIC21.8■■□□□ 1.08
NEK1Q96PY6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 AC141257.4-201ENST00000634557 245 ntBASIC21.8■■□□□ 1.08
NEK1Q96PY6 AC136944.6-201ENST00000634818 245 ntBASIC21.8■■□□□ 1.08
NEK1Q96PY6 AC097493.4-201ENST00000641197 219 ntBASIC21.8■■□□□ 1.08
NEK1Q96PY6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 KRT18P21-201ENST00000515767 1272 ntBASIC21.79■■□□□ 1.08
NEK1Q96PY6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEK1Q96PY6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
NEK1Q96PY6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.78■■□□□ 1.08
NEK1Q96PY6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NEK1Q96PY6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NEK1Q96PY6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.77■■□□□ 1.08
NEK1Q96PY6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.77■■□□□ 1.08
NEK1Q96PY6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.77■■□□□ 1.08
NEK1Q96PY6 AC010203.1-204ENST00000548782 407 ntBASIC21.77■■□□□ 1.08
NEK1Q96PY6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NEK1Q96PY6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NEK1Q96PY6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.77■■□□□ 1.07
NEK1Q96PY6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms