Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3BQ96PB8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 LINC01126-201ENST00000623515 1646 ntBASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3BQ96PB8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 AF228730.7-201ENST00000641842 219 ntBASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC3BQ96PB8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 TP73-AS1-210ENST00000637775 1455 ntBASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LRRC3BQ96PB8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 IL9RP2-201ENST00000423948 1312 ntBASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 AC005082.1-201ENST00000413042 2259 ntBASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 SLC25A1P1-201ENST00000528351 927 ntBASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 AP001005.1-201ENST00000571755 1248 ntBASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3BQ96PB8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms