Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 AC005336.2-201ENST00000593183 939 ntBASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 AC084346.2-201ENST00000607097 949 ntBASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 PRSS29P-201ENST00000440800 595 ntBASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 MEIS3P1-201ENST00000495167 958 ntBASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 AL020996.1-203ENST00000536896 2307 ntBASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNTNAP3BQ96NU0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 OR7E14P-202ENST00000530490 1290 ntBASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 AL359881.2-201ENST00000602973 570 ntBASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 KRT8P3-201ENST00000519669 1449 ntBASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3BQ96NU0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3BQ96NU0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms