Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 AC093677.2-201ENST00000600169 1863 ntBASIC18.99■□□□□ 0.63
C9orf72Q96LT7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 ECEL1P3-201ENST00000427961 737 ntBASIC18.98■□□□□ 0.63
C9orf72Q96LT7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 AC134043.2-201ENST00000624206 2238 ntBASIC18.98■□□□□ 0.63
C9orf72Q96LT7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C9orf72Q96LT7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 KRT8P3-201ENST00000519669 1449 ntBASIC18.97■□□□□ 0.63
C9orf72Q96LT7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C9orf72Q96LT7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.97■□□□□ 0.63
C9orf72Q96LT7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 MYC-208ENST00000641036 567 ntBASIC18.96■□□□□ 0.63
C9orf72Q96LT7 KRT8P45-201ENST00000414328 1447 ntBASIC18.96■□□□□ 0.63
C9orf72Q96LT7 AC112777.1-201ENST00000540175 1423 ntBASIC18.96■□□□□ 0.63
C9orf72Q96LT7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms