Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCPIP1Q96JH7 AC138028.4-201ENST00000564984 1845 ntBASIC19.39■□□□□ 0.7
VCPIP1Q96JH7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.39■□□□□ 0.7
VCPIP1Q96JH7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCPIP1Q96JH7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 PHGDH-209ENST00000641074 1780 ntBASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
VCPIP1Q96JH7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 FLJ13224-201ENST00000313737 1514 ntBASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCPIP1Q96JH7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 RCN1P1-201ENST00000400413 996 ntBASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 ECEL1P2-202ENST00000465689 757 ntBASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 AC010240.3-201ENST00000607688 395 ntBASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 AC097493.4-201ENST00000641197 219 ntBASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms