Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 KRT8P41-201ENST00000533985 1514 ntBASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AC008040.2-201ENST00000461049 708 ntBASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AL034374.2-201ENST00000605281 548 ntBASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AC011298.2-201ENST00000617989 482 ntBASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 AC139713.2-201ENST00000641328 2723 ntBASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A3Q96HJ5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 VN1R11P-201ENST00000407795 868 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AC091390.4-202ENST00000476426 537 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AC116562.2-201ENST00000507042 360 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AC022784.5-201ENST00000522241 437 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 AC106730.3-201ENST00000624568 641 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 FSCN1P1-201ENST00000568912 1481 ntBASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A3Q96HJ5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
MS4A3Q96HJ5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.71■□□□□ 0.26
MS4A3Q96HJ5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
MS4A3Q96HJ5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AL627171.1-201ENST00000618845 1308 ntBASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AC004951.3-201ENST00000418645 1148 ntBASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms