Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 AL118508.1-201ENST00000613502 2345 ntBASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 AC008556.1-201ENST00000610908 2040 ntBASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 RCC2P6-201ENST00000526625 1557 ntBASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP6Q96FZ7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AC124283.5-201ENST00000624661 1809 ntBASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AL390719.1-204ENST00000412397 1219 ntBASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AC068587.9-201ENST00000641814 219 ntBASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AP001094.4-201ENST00000579008 2176 ntBASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 AC018695.7-201ENST00000624587 2492 ntBASIC18.54■□□□□ 0.56
CHMP6Q96FZ7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 AL023806.1-201ENST00000603994 1649 ntBASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 DUSP5P2-201ENST00000426873 1033 ntBASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP6Q96FZ7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms