Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.65■■□□□ 1.22
RPGRQ92834 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPGRQ92834 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPGRQ92834 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.64■■□□□ 1.22
RPGRQ92834 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.64■■□□□ 1.22
RPGRQ92834 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPGRQ92834 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.64■■□□□ 1.21
RPGRQ92834 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
RPGRQ92834 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.64■■□□□ 1.21
RPGRQ92834 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.64■■□□□ 1.21
RPGRQ92834 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.64■■□□□ 1.21
RPGRQ92834 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPGRQ92834 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RPGRQ92834 AC099343.3-201ENST00000605834 2503 ntBASIC22.63■■□□□ 1.21
RPGRQ92834 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RPGRQ92834 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RPGRQ92834 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.63■■□□□ 1.21
RPGRQ92834 AC106730.1-201ENST00000566722 1090 ntBASIC22.63■■□□□ 1.21
RPGRQ92834 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.63■■□□□ 1.21
RPGRQ92834 AC112777.1-201ENST00000540175 1423 ntBASIC22.63■■□□□ 1.21
RPGRQ92834 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPGRQ92834 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPGRQ92834 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RPGRQ92834 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPGRQ92834 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPGRQ92834 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RPGRQ92834 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPGRQ92834 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.62■■□□□ 1.21
RPGRQ92834 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.62■■□□□ 1.21
RPGRQ92834 FGFR3P6-201ENST00000457012 610 ntBASIC22.62■■□□□ 1.21
RPGRQ92834 POLD2P1-201ENST00000511220 997 ntBASIC22.62■■□□□ 1.21
RPGRQ92834 AC139887.3-201ENST00000568585 713 ntBASIC22.62■■□□□ 1.21
RPGRQ92834 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPGRQ92834 MTDHP3-201ENST00000594186 672 ntBASIC22.62■■□□□ 1.21
RPGRQ92834 AL049840.3-201ENST00000602669 611 ntBASIC22.62■■□□□ 1.21
RPGRQ92834 MIR7706-201ENST00000613747 67 ntBASIC22.62■■□□□ 1.21
RPGRQ92834 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.62■■□□□ 1.21
RPGRQ92834 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.62■■□□□ 1.21
RPGRQ92834 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
RPGRQ92834 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RPGRQ92834 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RPGRQ92834 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.61■■□□□ 1.21
RPGRQ92834 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.61■■□□□ 1.21
RPGRQ92834 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RPGRQ92834 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.61■■□□□ 1.21
RPGRQ92834 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RPGRQ92834 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RPGRQ92834 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.61■■□□□ 1.21
RPGRQ92834 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.61■■□□□ 1.21
RPGRQ92834 RBM17P3-201ENST00000417687 1192 ntBASIC22.61■■□□□ 1.21
RPGRQ92834 AC068472.1-201ENST00000474589 881 ntBASIC22.61■■□□□ 1.21
RPGRQ92834 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.61■■□□□ 1.21
RPGRQ92834 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.61■■□□□ 1.21
RPGRQ92834 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 AC092865.5-201ENST00000545435 363 ntBASIC22.61■■□□□ 1.21
RPGRQ92834 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.61■■□□□ 1.21
RPGRQ92834 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RPGRQ92834 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.61■■□□□ 1.21
RPGRQ92834 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RPGRQ92834 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
RPGRQ92834 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.61■■□□□ 1.21
RPGRQ92834 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPGRQ92834 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.61■■□□□ 1.21
RPGRQ92834 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPGRQ92834 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPGRQ92834 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPGRQ92834 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RPGRQ92834 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RPGRQ92834 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPGRQ92834 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
RPGRQ92834 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPGRQ92834 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPGRQ92834 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.6■■□□□ 1.21
RPGRQ92834 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RPGRQ92834 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms