Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 PP12613-201ENST00000424958 2230 ntBASIC16.23■□□□□ 0.19
AP3S1Q92572 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.23■□□□□ 0.19
AP3S1Q92572 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 TSPY23P-201ENST00000440136 739 ntBASIC16.23■□□□□ 0.19
AP3S1Q92572 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 AL121906.2-201ENST00000621597 723 ntBASIC16.23■□□□□ 0.19
AP3S1Q92572 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3S1Q92572 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S1Q92572 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3S1Q92572 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S1Q92572 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3S1Q92572 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
AP3S1Q92572 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
AP3S1Q92572 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP3S1Q92572 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S1Q92572 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
AP3S1Q92572 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3S1Q92572 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP3S1Q92572 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
AP3S1Q92572 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 AC010980.2-201ENST00000587099 1412 ntBASIC16.21■□□□□ 0.19
AP3S1Q92572 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3S1Q92572 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AP3S1Q92572 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.21■□□□□ 0.19
AP3S1Q92572 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S1Q92572 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.21■□□□□ 0.19
AP3S1Q92572 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.21■□□□□ 0.19
AP3S1Q92572 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.21■□□□□ 0.19
AP3S1Q92572 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3S1Q92572 AC005829.2-201ENST00000571422 1056 ntBASIC16.21■□□□□ 0.19
AP3S1Q92572 BID-214ENST00000617586 542 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S1Q92572 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S1Q92572 AP001094.4-201ENST00000579008 2176 ntBASIC16.21■□□□□ 0.19
AP3S1Q92572 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms