Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.98■■□□□ 1.43
RTF1Q92541 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RTF1Q92541 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.98■■□□□ 1.43
RTF1Q92541 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.98■■□□□ 1.43
RTF1Q92541 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RTF1Q92541 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.98■■□□□ 1.43
RTF1Q92541 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.98■■□□□ 1.43
RTF1Q92541 DRAXINP1-201ENST00000437611 948 ntBASIC23.98■■□□□ 1.43
RTF1Q92541 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.98■■□□□ 1.43
RTF1Q92541 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.98■■□□□ 1.43
RTF1Q92541 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 TPSP2-201ENST00000561760 610 ntBASIC23.98■■□□□ 1.43
RTF1Q92541 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.98■■□□□ 1.43
RTF1Q92541 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.98■■□□□ 1.43
RTF1Q92541 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.98■■□□□ 1.43
RTF1Q92541 AL353692.3-201ENST00000407031 1396 ntBASIC23.98■■□□□ 1.43
RTF1Q92541 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RTF1Q92541 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTF1Q92541 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.97■■□□□ 1.43
RTF1Q92541 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.97■■□□□ 1.43
RTF1Q92541 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 AL450487.1-201ENST00000426799 995 ntBASIC23.97■■□□□ 1.43
RTF1Q92541 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.97■■□□□ 1.43
RTF1Q92541 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.97■■□□□ 1.43
RTF1Q92541 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.97■■□□□ 1.43
RTF1Q92541 LINC00265-3P-201ENST00000447588 903 ntBASIC23.97■■□□□ 1.43
RTF1Q92541 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.97■■□□□ 1.43
RTF1Q92541 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RTF1Q92541 AC008687.5-201ENST00000593746 558 ntBASIC23.97■■□□□ 1.43
RTF1Q92541 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.97■■□□□ 1.43
RTF1Q92541 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RTF1Q92541 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RTF1Q92541 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTF1Q92541 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.96■■□□□ 1.43
RTF1Q92541 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 GUSBP12-201ENST00000513727 720 ntBASIC23.96■■□□□ 1.43
RTF1Q92541 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.96■■□□□ 1.43
RTF1Q92541 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 PRELID1P1-202ENST00000567272 903 ntBASIC23.96■■□□□ 1.43
RTF1Q92541 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.96■■□□□ 1.43
RTF1Q92541 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTF1Q92541 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.96■■□□□ 1.43
RTF1Q92541 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
RTF1Q92541 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RTF1Q92541 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
RTF1Q92541 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RTF1Q92541 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.95■■□□□ 1.43
RTF1Q92541 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
RTF1Q92541 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTF1Q92541 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTF1Q92541 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTF1Q92541 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTF1Q92541 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.95■■□□□ 1.42
RTF1Q92541 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.95■■□□□ 1.42
RTF1Q92541 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RTF1Q92541 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
RTF1Q92541 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.95■■□□□ 1.42
RTF1Q92541 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
RTF1Q92541 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
RTF1Q92541 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTF1Q92541 TOB2P1-201ENST00000469761 992 ntBASIC23.94■■□□□ 1.42
RTF1Q92541 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.94■■□□□ 1.42
RTF1Q92541 AP000867.3-201ENST00000524675 377 ntBASIC23.94■■□□□ 1.42
RTF1Q92541 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.94■■□□□ 1.42
RTF1Q92541 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.94■■□□□ 1.42
RTF1Q92541 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTF1Q92541 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTF1Q92541 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTF1Q92541 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms