Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GBF1Q92538 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GBF1Q92538 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.67■□□□□ 0.74
GBF1Q92538 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GBF1Q92538 INTS4P1-201ENST00000438455 1935 ntBASIC19.67■□□□□ 0.74
GBF1Q92538 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GBF1Q92538 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.67■□□□□ 0.74
GBF1Q92538 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GBF1Q92538 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GBF1Q92538 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
GBF1Q92538 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.67■□□□□ 0.74
GBF1Q92538 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GBF1Q92538 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.67■□□□□ 0.74
GBF1Q92538 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.67■□□□□ 0.74
GBF1Q92538 AC132008.2-207ENST00000454517 770 ntBASIC19.67■□□□□ 0.74
GBF1Q92538 AC112482.1-201ENST00000492080 688 ntBASIC19.67■□□□□ 0.74
GBF1Q92538 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.67■□□□□ 0.74
GBF1Q92538 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GBF1Q92538 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 AC112777.1-201ENST00000540175 1423 ntBASIC19.66■□□□□ 0.74
GBF1Q92538 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.66■□□□□ 0.74
GBF1Q92538 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GBF1Q92538 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GBF1Q92538 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.66■□□□□ 0.74
GBF1Q92538 AC023274.1-201ENST00000418278 595 ntBASIC19.66■□□□□ 0.74
GBF1Q92538 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.66■□□□□ 0.74
GBF1Q92538 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
GBF1Q92538 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GBF1Q92538 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.66■□□□□ 0.74
GBF1Q92538 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GBF1Q92538 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GBF1Q92538 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GBF1Q92538 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.65■□□□□ 0.74
GBF1Q92538 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 RCN1P2-201ENST00000398357 915 ntBASIC19.65■□□□□ 0.74
GBF1Q92538 AC211486.1-202ENST00000416371 468 ntBASIC19.65■□□□□ 0.74
GBF1Q92538 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.65■□□□□ 0.74
GBF1Q92538 ABCD1P5-201ENST00000445663 754 ntBASIC19.65■□□□□ 0.74
GBF1Q92538 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
GBF1Q92538 AC211476.1-201ENST00000503899 468 ntBASIC19.65■□□□□ 0.74
GBF1Q92538 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 AL139288.1-201ENST00000623748 933 ntBASIC19.65■□□□□ 0.74
GBF1Q92538 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
GBF1Q92538 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
GBF1Q92538 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GBF1Q92538 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.65■□□□□ 0.74
GBF1Q92538 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.65■□□□□ 0.74
GBF1Q92538 TP73-AS1-210ENST00000637775 1455 ntBASIC19.64■□□□□ 0.74
GBF1Q92538 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
GBF1Q92538 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.64■□□□□ 0.73
GBF1Q92538 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
GBF1Q92538 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.64■□□□□ 0.73
GBF1Q92538 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.64■□□□□ 0.73
GBF1Q92538 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GBF1Q92538 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.64■□□□□ 0.73
GBF1Q92538 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.64■□□□□ 0.73
GBF1Q92538 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.64■□□□□ 0.73
GBF1Q92538 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.64■□□□□ 0.73
GBF1Q92538 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
GBF1Q92538 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.64■□□□□ 0.73
GBF1Q92538 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GBF1Q92538 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms