Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX1Q92499 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX1Q92499 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
DDX1Q92499 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
DDX1Q92499 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.61■□□□□ 0.73
DDX1Q92499 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX1Q92499 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX1Q92499 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX1Q92499 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.61■□□□□ 0.73
DDX1Q92499 AC112497.1-201ENST00000624824 639 ntBASIC19.61■□□□□ 0.73
DDX1Q92499 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX1Q92499 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX1Q92499 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX1Q92499 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
DDX1Q92499 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.6■□□□□ 0.73
DDX1Q92499 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX1Q92499 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX1Q92499 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDX1Q92499 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 MIR149-201ENST00000384879 89 ntBASIC19.6■□□□□ 0.73
DDX1Q92499 HMGA1P5-201ENST00000412453 271 ntBASIC19.6■□□□□ 0.73
DDX1Q92499 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
DDX1Q92499 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.6■□□□□ 0.73
DDX1Q92499 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX1Q92499 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDX1Q92499 AL691432.3-201ENST00000621860 400 ntBASIC19.6■□□□□ 0.73
DDX1Q92499 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
DDX1Q92499 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX1Q92499 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX1Q92499 AC009102.3-201ENST00000623118 1491 ntBASIC19.6■□□□□ 0.73
DDX1Q92499 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
DDX1Q92499 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX1Q92499 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX1Q92499 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.59■□□□□ 0.73
DDX1Q92499 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
DDX1Q92499 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX1Q92499 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
DDX1Q92499 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX1Q92499 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX1Q92499 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX1Q92499 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX1Q92499 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
DDX1Q92499 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX1Q92499 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDX1Q92499 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
DDX1Q92499 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX1Q92499 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms