Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 MIR658-201ENST00000385210 100 ntBASIC16.49■□□□□ 0.23
CHD6Q8TD26 ADH5P3-201ENST00000433842 1137 ntBASIC16.49■□□□□ 0.23
CHD6Q8TD26 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD6Q8TD26 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CHD6Q8TD26 AC008556.1-201ENST00000610908 2040 ntBASIC16.49■□□□□ 0.23
CHD6Q8TD26 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 AL390754.1-201ENST00000619088 582 ntBASIC16.48■□□□□ 0.23
CHD6Q8TD26 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHD6Q8TD26 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.48■□□□□ 0.23
CHD6Q8TD26 AC121338.2-201ENST00000622535 1744 ntBASIC16.48■□□□□ 0.23
CHD6Q8TD26 FP700111.2-201ENST00000619190 1892 ntBASIC16.47■□□□□ 0.23
CHD6Q8TD26 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 AC004877.2-201ENST00000623941 599 ntBASIC16.47■□□□□ 0.23
CHD6Q8TD26 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 AC003101.2-201ENST00000612557 442 ntBASIC16.47■□□□□ 0.23
CHD6Q8TD26 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.47■□□□□ 0.23
CHD6Q8TD26 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.47■□□□□ 0.23
CHD6Q8TD26 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHD6Q8TD26 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 AC244015.2-201ENST00000616358 1861 ntBASIC16.46■□□□□ 0.23
CHD6Q8TD26 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 AC107890.1-201ENST00000422478 521 ntBASIC16.46■□□□□ 0.23
CHD6Q8TD26 KLF2P3-201ENST00000451977 1087 ntBASIC16.46■□□□□ 0.23
CHD6Q8TD26 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.46■□□□□ 0.23
CHD6Q8TD26 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 MIR6727-201ENST00000620702 65 ntBASIC16.46■□□□□ 0.23
CHD6Q8TD26 AC010507.1-201ENST00000633895 436 ntBASIC16.46■□□□□ 0.23
CHD6Q8TD26 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD6Q8TD26 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.46■□□□□ 0.23
CHD6Q8TD26 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms