Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PCDHB17P-201ENST00000539533 2393 ntBASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 AP006587.3-201ENST00000525742 1516 ntBASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SPTSSBQ8NFR3 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC241377.3-202ENST00000626088 1088 ntBASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC241585.3-202ENST00000628937 1088 ntBASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC245100.8-202ENST00000629247 1058 ntBASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC055733.4-201ENST00000638462 1354 ntBASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 AC009102.2-201ENST00000606772 1639 ntBASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 REXO1L1P-201ENST00000379010 6598 ntBASIC10.11□□□□□ -0.79
SPTSSBQ8NFR3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 AC011676.5-201ENST00000624864 2660 ntBASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms