Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 AL355355.2-201ENST00000442321 338 ntBASIC18.02■□□□□ 0.48
CPSF7Q8N684 AP002982.1-201ENST00000492365 877 ntBASIC18.02■□□□□ 0.48
CPSF7Q8N684 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.02■□□□□ 0.48
CPSF7Q8N684 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.02■□□□□ 0.48
CPSF7Q8N684 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPSF7Q8N684 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.02■□□□□ 0.47
CPSF7Q8N684 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CPSF7Q8N684 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CPSF7Q8N684 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPSF7Q8N684 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 AC139713.2-201ENST00000641328 2723 ntBASIC18.01■□□□□ 0.47
CPSF7Q8N684 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 LINC01023-201ENST00000606054 436 ntBASIC18.01■□□□□ 0.47
CPSF7Q8N684 AC073195.1-201ENST00000607241 877 ntBASIC18.01■□□□□ 0.47
CPSF7Q8N684 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.01■□□□□ 0.47
CPSF7Q8N684 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPSF7Q8N684 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPSF7Q8N684 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 AL357033.4-201ENST00000617703 1807 ntBASIC18■□□□□ 0.47
CPSF7Q8N684 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18■□□□□ 0.47
CPSF7Q8N684 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CPSF7Q8N684 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18■□□□□ 0.47
CPSF7Q8N684 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18■□□□□ 0.47
CPSF7Q8N684 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18■□□□□ 0.47
CPSF7Q8N684 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 C1QL1P1-201ENST00000568105 661 ntBASIC18■□□□□ 0.47
CPSF7Q8N684 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18■□□□□ 0.47
CPSF7Q8N684 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPSF7Q8N684 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CPSF7Q8N684 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18■□□□□ 0.47
CPSF7Q8N684 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPSF7Q8N684 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms