Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 RNA5SP416-201ENST00000516838 111 ntBASIC25.46■■□□□ 1.67
XRN1Q8IZH2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
XRN1Q8IZH2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
XRN1Q8IZH2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
XRN1Q8IZH2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
XRN1Q8IZH2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
XRN1Q8IZH2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
XRN1Q8IZH2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
XRN1Q8IZH2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
XRN1Q8IZH2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 COA5-202ENST00000409997 557 ntTSL 4 BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
XRN1Q8IZH2 AC112482.1-201ENST00000492080 688 ntBASIC25.43■■□□□ 1.66
XRN1Q8IZH2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 AC105339.3-201ENST00000560043 636 ntBASIC25.43■■□□□ 1.66
XRN1Q8IZH2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 LINC02084-201ENST00000606069 1096 ntBASIC25.43■■□□□ 1.66
XRN1Q8IZH2 AC083906.6-201ENST00000641366 219 ntBASIC25.43■■□□□ 1.66
XRN1Q8IZH2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
XRN1Q8IZH2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
XRN1Q8IZH2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 RPS8P6-201ENST00000426177 609 ntBASIC25.41■■□□□ 1.66
XRN1Q8IZH2 NKAPP1-205ENST00000585790 367 ntBASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms