Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PRKY-204ENST00000533551 1019 ntBASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 MIR4651-201ENST00000582622 73 ntBASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 AC008687.6-201ENST00000596318 630 ntBASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 POU5F1P3-201ENST00000428824 1078 ntBASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 AC012313.1-201ENST00000593393 3059 ntBASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 AC012317.2-201ENST00000623305 2251 ntBASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM42Q8IWZ5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 ABHD17AP1-201ENST00000358206 933 ntBASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 MYLKP1-201ENST00000509077 1580 ntBASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 AC004264.1-201ENST00000608354 794 ntBASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 TNRC18P3-201ENST00000441896 2691 ntBASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM42Q8IWZ5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms