Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN4BQ8IWT1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 MYLKP1-201ENST00000509077 1580 ntBASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 KRT8P26-201ENST00000534154 1276 ntBASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 Z83836.1-201ENST00000624605 1642 ntBASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN4BQ8IWT1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SCN4BQ8IWT1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCN4BQ8IWT1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCN4BQ8IWT1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 AC005332.3-201ENST00000589904 676 ntBASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN4BQ8IWT1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 MIR149-201ENST00000384879 89 ntBASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 ATP5G2P1-201ENST00000433580 426 ntBASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 ANO7L1-203ENST00000602586 1720 ntBASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 AC009102.3-201ENST00000623118 1491 ntBASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN4BQ8IWT1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN4BQ8IWT1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms