Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 SNORA78-201ENST00000459373 127 ntBASIC16.41■□□□□ 0.22
LRRC28Q86X40 AP002982.1-201ENST00000492365 877 ntBASIC16.41■□□□□ 0.22
LRRC28Q86X40 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 AC073195.1-201ENST00000607241 877 ntBASIC16.41■□□□□ 0.22
LRRC28Q86X40 AC113410.3-201ENST00000623366 203 ntBASIC16.41■□□□□ 0.22
LRRC28Q86X40 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 KRT17P2-201ENST00000300992 1314 ntBASIC16.41■□□□□ 0.22
LRRC28Q86X40 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 AC012317.2-201ENST00000623305 2251 ntBASIC16.4■□□□□ 0.22
LRRC28Q86X40 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC28Q86X40 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC28Q86X40 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRC28Q86X40 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
LRRC28Q86X40 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC28Q86X40 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC28Q86X40 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.38■□□□□ 0.21
LRRC28Q86X40 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 TSPY7P-201ENST00000431358 1114 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms