Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF111Q6ZNA4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 FSCN1P1-201ENST00000568912 1481 ntBASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 AL596275.1-201ENST00000423464 877 ntBASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 AP003071.4-201ENST00000562276 1284 ntBASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 MIR6786-201ENST00000616843 113 ntBASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
RNF111Q6ZNA4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 AC141586.5-201ENST00000624546 2050 ntBASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 RCC2P6-201ENST00000526625 1557 ntBASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 AC004951.3-201ENST00000418645 1148 ntBASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF111Q6ZNA4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 B3GAT3P1-201ENST00000471720 806 ntBASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 AC011298.2-201ENST00000617989 482 ntBASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF111Q6ZNA4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms