Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 MIR3180-3-201ENST00000584616 94 ntBASIC16.61■□□□□ 0.25
RTL6Q6ICC9 AL121672.3-201ENST00000608644 468 ntBASIC16.61■□□□□ 0.25
RTL6Q6ICC9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 KRT8P7-201ENST00000533003 1432 ntBASIC16.61■□□□□ 0.25
RTL6Q6ICC9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 FP475955.4-201ENST00000623131 1990 ntBASIC16.6■□□□□ 0.25
RTL6Q6ICC9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 AP002383.4-201ENST00000442518 975 ntBASIC16.6■□□□□ 0.25
RTL6Q6ICC9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 AC092329.2-201ENST00000598402 547 ntBASIC16.6■□□□□ 0.25
RTL6Q6ICC9 AC010240.3-201ENST00000607688 395 ntBASIC16.6■□□□□ 0.25
RTL6Q6ICC9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RTL6Q6ICC9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 AC093525.10-201ENST00000625130 1569 ntBASIC16.59■□□□□ 0.25
RTL6Q6ICC9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RTL6Q6ICC9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTL6Q6ICC9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms