Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 AC140113.2-201ENST00000604370 208 ntBASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 LINC01126-201ENST00000623515 1646 ntBASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 MIR1233-2-201ENST00000408138 82 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 MIR1233-1-201ENST00000408722 82 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 DANCR-204ENST00000444958 709 ntTSL 3 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 ABCD1P5-201ENST00000445663 754 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 AC009533.2-201ENST00000543664 586 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 AC008687.5-201ENST00000593746 558 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 MYLKP1-201ENST00000509077 1580 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 TERC-201ENST00000602385 541 ntBASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC27.78■■■□□ 2.04
CDC42BPAQ5VT25 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 RPS2P1-201ENST00000434010 821 ntBASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 MTCL1P1-201ENST00000446207 792 ntBASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC27.77■■■□□ 2.04
CDC42BPAQ5VT25 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
CDC42BPAQ5VT25 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 AC025062.2-201ENST00000605477 670 ntBASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDC42BPAQ5VT25 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 NMU-202ENST00000505262 693 ntTSL 3 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 CD63-204ENST00000546939 779 ntTSL 3 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 AC010327.4-202ENST00000591484 748 ntBASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 AC116407.3-201ENST00000623905 1129 ntBASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
CDC42BPAQ5VT25 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms