Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 SPDYE15P-201ENST00000424157 909 ntBASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 AL359075.1-203ENST00000462729 1002 ntBASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 AC126763.1-201ENST00000552015 2118 ntBASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC01556Q5JQF7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 AL136038.4-201ENST00000603606 1261 ntBASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC01556Q5JQF7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01556Q5JQF7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms