Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 MYLKP1-201ENST00000509077 1580 ntBASIC20.94■□□□□ 0.94
LONRF3Q496Y0 GPAT2P1-201ENST00000444924 1672 ntBASIC20.94■□□□□ 0.94
LONRF3Q496Y0 AL023284.2-201ENST00000405850 579 ntBASIC20.94■□□□□ 0.94
LONRF3Q496Y0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 AC116562.4-202ENST00000641738 218 ntBASIC20.94■□□□□ 0.94
LONRF3Q496Y0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.94■□□□□ 0.94
LONRF3Q496Y0 ESPNP-201ENST00000270691 2015 ntBASIC20.94■□□□□ 0.94
LONRF3Q496Y0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 AC007663.1-201ENST00000438948 1240 ntBASIC20.93■□□□□ 0.94
LONRF3Q496Y0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.93■□□□□ 0.94
LONRF3Q496Y0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LONRF3Q496Y0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AC093677.2-201ENST00000600169 1863 ntBASIC20.92■□□□□ 0.94
LONRF3Q496Y0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 MIR564-202ENST00000385049 94 ntBASIC20.92■□□□□ 0.94
LONRF3Q496Y0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 KRT18P41-201ENST00000518924 1277 ntBASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 AC067852.2-201ENST00000590513 2313 ntBASIC20.92■□□□□ 0.94
LONRF3Q496Y0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LONRF3Q496Y0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 CCR12P-201ENST00000446203 998 ntBASIC20.91■□□□□ 0.94
LONRF3Q496Y0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms