Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NFX1Q12986 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
NFX1Q12986 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.23■□□□□ 0.83
NFX1Q12986 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.22■□□□□ 0.83
NFX1Q12986 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
NFX1Q12986 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.22■□□□□ 0.83
NFX1Q12986 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.22■□□□□ 0.83
NFX1Q12986 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NFX1Q12986 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.22■□□□□ 0.83
NFX1Q12986 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.22■□□□□ 0.83
NFX1Q12986 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 AC120498.9-201ENST00000339021 3867 ntBASIC20.22■□□□□ 0.83
NFX1Q12986 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 HEIH-201ENST00000623091 1652 ntBASIC20.22■□□□□ 0.83
NFX1Q12986 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NFX1Q12986 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.22■□□□□ 0.83
NFX1Q12986 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFX1Q12986 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NFX1Q12986 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NFX1Q12986 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.21■□□□□ 0.83
NFX1Q12986 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.21■□□□□ 0.83
NFX1Q12986 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.21■□□□□ 0.83
NFX1Q12986 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 AC004870.1-201ENST00000315132 882 ntBASIC20.21■□□□□ 0.83
NFX1Q12986 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.21■□□□□ 0.83
NFX1Q12986 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.21■□□□□ 0.83
NFX1Q12986 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.21■□□□□ 0.83
NFX1Q12986 AC090616.6-201ENST00000582640 721 ntBASIC20.21■□□□□ 0.83
NFX1Q12986 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 AC024563.2-201ENST00000603282 481 ntBASIC20.21■□□□□ 0.83
NFX1Q12986 AL390719.2-201ENST00000606993 987 ntBASIC20.21■□□□□ 0.83
NFX1Q12986 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NFX1Q12986 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.21■□□□□ 0.83
NFX1Q12986 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NFX1Q12986 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.21■□□□□ 0.83
NFX1Q12986 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.21■□□□□ 0.83
NFX1Q12986 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.21■□□□□ 0.83
NFX1Q12986 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFX1Q12986 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.2■□□□□ 0.82
NFX1Q12986 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NFX1Q12986 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NFX1Q12986 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
NFX1Q12986 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.2■□□□□ 0.82
NFX1Q12986 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.2■□□□□ 0.82
NFX1Q12986 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.2■□□□□ 0.82
NFX1Q12986 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.2■□□□□ 0.82
NFX1Q12986 GPR32P1-201ENST00000601788 811 ntBASIC20.2■□□□□ 0.82
NFX1Q12986 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NFX1Q12986 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFX1Q12986 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.19■□□□□ 0.82
NFX1Q12986 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 AC246785.2-201ENST00000432512 513 ntBASIC20.19■□□□□ 0.82
NFX1Q12986 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.19■□□□□ 0.82
NFX1Q12986 AL732292.2-201ENST00000609649 430 ntBASIC20.19■□□□□ 0.82
NFX1Q12986 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.19■□□□□ 0.82
NFX1Q12986 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.19■□□□□ 0.82
NFX1Q12986 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.19■□□□□ 0.82
NFX1Q12986 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NFX1Q12986 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.19■□□□□ 0.82
NFX1Q12986 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.19■□□□□ 0.82
NFX1Q12986 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
NFX1Q12986 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.19■□□□□ 0.82
NFX1Q12986 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
NFX1Q12986 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms