Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.29■■□□□ 1
HTRA3P83110 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.29■■□□□ 1
HTRA3P83110 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.29■■□□□ 1
HTRA3P83110 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.29■■□□□ 1
HTRA3P83110 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.29■■□□□ 1
HTRA3P83110 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.29■■□□□ 1
HTRA3P83110 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HTRA3P83110 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.29■■□□□ 1
HTRA3P83110 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 SLC25A6P5-201ENST00000435663 894 ntBASIC21.28■■□□□ 1
HTRA3P83110 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.28■■□□□ 1
HTRA3P83110 AC108073.2-201ENST00000464002 357 ntBASIC21.28■■□□□ 1
HTRA3P83110 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 AC092902.6-201ENST00000641783 218 ntBASIC21.28■■□□□ 1
HTRA3P83110 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.28■■□□□ 1
HTRA3P83110 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.28■■□□□ 1
HTRA3P83110 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.27■■□□□ 1
HTRA3P83110 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HTRA3P83110 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HTRA3P83110 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.27■■□□□ 1
HTRA3P83110 ATP5G2P4-201ENST00000442175 420 ntBASIC21.27■■□□□ 1
HTRA3P83110 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 LINC02560-201ENST00000596379 459 ntBASIC21.27■■□□□ 1
HTRA3P83110 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.27■■□□□ 1
HTRA3P83110 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 AC073592.5-201ENST00000624854 528 ntBASIC21.27■■□□□ 1
HTRA3P83110 AC105339.1-204ENST00000636249 355 ntBASIC21.27■■□□□ 1
HTRA3P83110 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
HTRA3P83110 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.27■■□□□ 1
HTRA3P83110 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.27■■□□□ 1
HTRA3P83110 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HTRA3P83110 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTRA3P83110 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HTRA3P83110 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.27■□□□□ 0.99
HTRA3P83110 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
HTRA3P83110 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.27■□□□□ 0.99
HTRA3P83110 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
HTRA3P83110 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.26■□□□□ 0.99
HTRA3P83110 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.26■□□□□ 0.99
HTRA3P83110 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.26■□□□□ 0.99
HTRA3P83110 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.26■□□□□ 0.99
HTRA3P83110 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.26■□□□□ 0.99
HTRA3P83110 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.26■□□□□ 0.99
HTRA3P83110 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 AC004877.2-201ENST00000623941 599 ntBASIC21.26■□□□□ 0.99
HTRA3P83110 AL022326.1-202ENST00000641533 845 ntBASIC21.26■□□□□ 0.99
HTRA3P83110 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.26■□□□□ 0.99
HTRA3P83110 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.26■□□□□ 0.99
HTRA3P83110 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.26■□□□□ 0.99
HTRA3P83110 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HTRA3P83110 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.26■□□□□ 0.99
HTRA3P83110 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTRA3P83110 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HTRA3P83110 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HTRA3P83110 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HTRA3P83110 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.25■□□□□ 0.99
HTRA3P83110 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.25■□□□□ 0.99
HTRA3P83110 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.25■□□□□ 0.99
HTRA3P83110 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms