Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.37■□□□□ 0.37
TRA2BP62995 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRA2BP62995 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 AC024243.1-201ENST00000609234 778 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 AL138966.2-201ENST00000621997 464 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 AC073912.3-201ENST00000624414 853 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 AC141257.4-201ENST00000634557 245 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 AC136944.6-201ENST00000634818 245 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRA2BP62995 NOC2LP1-202ENST00000452600 2235 ntBASIC17.37■□□□□ 0.37
TRA2BP62995 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRA2BP62995 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TRA2BP62995 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRA2BP62995 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.36■□□□□ 0.37
TRA2BP62995 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRA2BP62995 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.36■□□□□ 0.37
TRA2BP62995 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.36■□□□□ 0.37
TRA2BP62995 SLC25A3P1-201ENST00000443844 931 ntBASIC17.36■□□□□ 0.37
TRA2BP62995 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 MIR3917-201ENST00000580971 93 ntBASIC17.36■□□□□ 0.37
TRA2BP62995 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRA2BP62995 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRA2BP62995 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.36■□□□□ 0.37
TRA2BP62995 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.36■□□□□ 0.37
TRA2BP62995 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.36■□□□□ 0.37
TRA2BP62995 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
TRA2BP62995 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRA2BP62995 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRA2BP62995 AC020763.4-201ENST00000623414 4170 ntBASIC17.35■□□□□ 0.37
TRA2BP62995 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 BCL2-203ENST00000589955 5011 ntBASIC17.35■□□□□ 0.37
TRA2BP62995 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.35■□□□□ 0.37
TRA2BP62995 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
TRA2BP62995 SLC25A6P5-201ENST00000435663 894 ntBASIC17.35■□□□□ 0.37
TRA2BP62995 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.35■□□□□ 0.37
TRA2BP62995 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.35■□□□□ 0.37
TRA2BP62995 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.35■□□□□ 0.37
TRA2BP62995 AC008687.5-201ENST00000593746 558 ntBASIC17.35■□□□□ 0.37
TRA2BP62995 AC012306.2-201ENST00000609350 630 ntBASIC17.35■□□□□ 0.37
TRA2BP62995 AC097493.4-201ENST00000641197 219 ntBASIC17.35■□□□□ 0.37
TRA2BP62995 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRA2BP62995 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRA2BP62995 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms