Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC42P60953 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 POU5F1P3-201ENST00000428824 1078 ntBASIC16.85■□□□□ 0.29
CDC42P60953 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC42P60953 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 MIR4758-201ENST00000577688 71 ntBASIC16.85■□□□□ 0.29
CDC42P60953 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC42P60953 AC092437.1-201ENST00000624794 1048 ntBASIC16.85■□□□□ 0.29
CDC42P60953 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC42P60953 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDC42P60953 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42P60953 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDC42P60953 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDC42P60953 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42P60953 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDC42P60953 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDC42P60953 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC42P60953 SLC29A4P1-201ENST00000398760 971 ntBASIC16.84■□□□□ 0.29
CDC42P60953 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 CDCA4P2-201ENST00000441182 718 ntBASIC16.84■□□□□ 0.29
CDC42P60953 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC42P60953 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 MYC-209ENST00000641252 345 ntBASIC16.84■□□□□ 0.29
CDC42P60953 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC42P60953 NBPF21P-201ENST00000425093 1451 ntBASIC16.84■□□□□ 0.29
CDC42P60953 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CDC42P60953 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDC42P60953 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDC42P60953 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42P60953 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42P60953 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42P60953 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42P60953 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42P60953 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42P60953 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42P60953 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDC42P60953 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDC42P60953 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDC42P60953 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDC42P60953 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.83■□□□□ 0.28
CDC42P60953 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.83■□□□□ 0.28
CDC42P60953 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.83■□□□□ 0.28
CDC42P60953 AC083906.2-201ENST00000511578 360 ntBASIC16.83■□□□□ 0.28
CDC42P60953 PRSS44-201ENST00000515154 1146 ntBASIC16.83■□□□□ 0.28
CDC42P60953 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms