Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.72□□□□□ -0.21
CMC4P56277 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.72□□□□□ -0.21
CMC4P56277 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.72□□□□□ -0.21
CMC4P56277 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CMC4P56277 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMC4P56277 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CMC4P56277 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.72□□□□□ -0.21
CMC4P56277 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CMC4P56277 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CMC4P56277 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CMC4P56277 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.71□□□□□ -0.21
CMC4P56277 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.71□□□□□ -0.21
CMC4P56277 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.71□□□□□ -0.21
CMC4P56277 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.71□□□□□ -0.21
CMC4P56277 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.71□□□□□ -0.21
CMC4P56277 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.71□□□□□ -0.21
CMC4P56277 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.71□□□□□ -0.21
CMC4P56277 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.71□□□□□ -0.21
CMC4P56277 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.71□□□□□ -0.21
CMC4P56277 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.71□□□□□ -0.21
CMC4P56277 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.71□□□□□ -0.21
CMC4P56277 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CMC4P56277 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMC4P56277 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.71□□□□□ -0.22
CMC4P56277 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CMC4P56277 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.71□□□□□ -0.22
CMC4P56277 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMC4P56277 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMC4P56277 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CMC4P56277 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
CMC4P56277 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMC4P56277 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CMC4P56277 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CMC4P56277 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CMC4P56277 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.7□□□□□ -0.22
CMC4P56277 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.7□□□□□ -0.22
CMC4P56277 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.7□□□□□ -0.22
CMC4P56277 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.7□□□□□ -0.22
CMC4P56277 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms