Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PAX9P55771 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.79□□□□□ -0.04
PAX9P55771 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PAX9P55771 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.79□□□□□ -0.04
PAX9P55771 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PAX9P55771 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PAX9P55771 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.79□□□□□ -0.04
PAX9P55771 MIR4758-201ENST00000577688 71 ntBASIC14.79□□□□□ -0.04
PAX9P55771 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.79□□□□□ -0.04
PAX9P55771 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX9P55771 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.79□□□□□ -0.04
PAX9P55771 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX9P55771 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.78□□□□□ -0.04
PAX9P55771 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.78□□□□□ -0.04
PAX9P55771 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.78□□□□□ -0.04
PAX9P55771 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.78□□□□□ -0.04
PAX9P55771 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 PRKY-204ENST00000533551 1019 ntBASIC14.78□□□□□ -0.04
PAX9P55771 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.78□□□□□ -0.04
PAX9P55771 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 AP001094.4-201ENST00000579008 2176 ntBASIC14.78□□□□□ -0.04
PAX9P55771 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PAX9P55771 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.78□□□□□ -0.04
PAX9P55771 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX9P55771 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.77□□□□□ -0.04
PAX9P55771 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PAX9P55771 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.77□□□□□ -0.04
PAX9P55771 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.77□□□□□ -0.04
PAX9P55771 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PAX9P55771 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.77□□□□□ -0.04
PAX9P55771 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PAX9P55771 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms