Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 AC079781.3-201ENST00000449110 356 ntBASIC19.7■□□□□ 0.74
VCPP55072 TSSC2-201ENST00000450217 709 ntBASIC19.7■□□□□ 0.74
VCPP55072 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 WIZP1-201ENST00000531444 2299 ntBASIC19.7■□□□□ 0.74
VCPP55072 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VCPP55072 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 AC104581.1-202ENST00000635932 2618 ntBASIC19.7■□□□□ 0.74
VCPP55072 AC009113.1-201ENST00000570267 2443 ntBASIC19.7■□□□□ 0.74
VCPP55072 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VCPP55072 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 AP000523.1-201ENST00000398242 1049 ntBASIC19.69■□□□□ 0.74
VCPP55072 AL645929.1-201ENST00000420084 975 ntBASIC19.69■□□□□ 0.74
VCPP55072 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 AC079776.4-201ENST00000511039 504 ntBASIC19.69■□□□□ 0.74
VCPP55072 AL160237.2-201ENST00000556165 472 ntBASIC19.69■□□□□ 0.74
VCPP55072 AL671883.3-201ENST00000603274 991 ntBASIC19.69■□□□□ 0.74
VCPP55072 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.69■□□□□ 0.74
VCPP55072 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VCPP55072 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.69■□□□□ 0.74
VCPP55072 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPP55072 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VCPP55072 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.68■□□□□ 0.74
VCPP55072 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.68■□□□□ 0.74
VCPP55072 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPP55072 CA15P1-201ENST00000481698 905 ntBASIC19.68■□□□□ 0.74
VCPP55072 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPP55072 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 AL732292.2-201ENST00000609649 430 ntBASIC19.68■□□□□ 0.74
VCPP55072 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.68■□□□□ 0.74
VCPP55072 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VCPP55072 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPP55072 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VCPP55072 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPP55072 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPP55072 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPP55072 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
VCPP55072 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.67■□□□□ 0.74
VCPP55072 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VCPP55072 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VCPP55072 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VCPP55072 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.67■□□□□ 0.74
VCPP55072 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 AC083906.6-201ENST00000641366 219 ntBASIC19.67■□□□□ 0.74
VCPP55072 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
VCPP55072 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VCPP55072 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
VCPP55072 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VCPP55072 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPP55072 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
VCPP55072 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.66■□□□□ 0.74
VCPP55072 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPP55072 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPP55072 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCPP55072 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms