Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PDE1AP54750 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PDE1AP54750 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
PDE1AP54750 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PDE1AP54750 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.48■■□□□ 1.19
PDE1AP54750 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.48■■□□□ 1.19
PDE1AP54750 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.48■■□□□ 1.19
PDE1AP54750 AL024508.2-201ENST00000607749 1894 ntBASIC22.48■■□□□ 1.19
PDE1AP54750 AC018470.1-201ENST00000624790 3129 ntBASIC22.48■■□□□ 1.19
PDE1AP54750 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.48■■□□□ 1.19
PDE1AP54750 AC211429.1-201ENST00000415277 523 ntBASIC22.48■■□□□ 1.19
PDE1AP54750 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.48■■□□□ 1.19
PDE1AP54750 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PDE1AP54750 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PDE1AP54750 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PDE1AP54750 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.48■■□□□ 1.19
PDE1AP54750 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
PDE1AP54750 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 REXO1L9P-201ENST00000604264 2108 ntBASIC22.48■■□□□ 1.19
PDE1AP54750 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDE1AP54750 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
PDE1AP54750 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.47■■□□□ 1.19
PDE1AP54750 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
PDE1AP54750 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.47■■□□□ 1.19
PDE1AP54750 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 MIR3917-201ENST00000580971 93 ntBASIC22.47■■□□□ 1.19
PDE1AP54750 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.47■■□□□ 1.19
PDE1AP54750 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.47■■□□□ 1.19
PDE1AP54750 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 AC073508.3-201ENST00000619697 1419 ntBASIC22.47■■□□□ 1.19
PDE1AP54750 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 AL096828.2-201ENST00000567259 1965 ntBASIC22.47■■□□□ 1.19
PDE1AP54750 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDE1AP54750 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.46■■□□□ 1.19
PDE1AP54750 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE1AP54750 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.46■■□□□ 1.19
PDE1AP54750 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.46■■□□□ 1.19
PDE1AP54750 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.46■■□□□ 1.19
PDE1AP54750 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.46■■□□□ 1.19
PDE1AP54750 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.46■■□□□ 1.19
PDE1AP54750 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE1AP54750 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE1AP54750 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.46■■□□□ 1.19
PDE1AP54750 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PDE1AP54750 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PDE1AP54750 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PDE1AP54750 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE1AP54750 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
PDE1AP54750 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PDE1AP54750 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE1AP54750 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
PDE1AP54750 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PDE1AP54750 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PDE1AP54750 TERF1P1-201ENST00000311003 1181 ntBASIC22.45■■□□□ 1.18
PDE1AP54750 AC113347.1-201ENST00000413321 391 ntBASIC22.45■■□□□ 1.18
PDE1AP54750 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.45■■□□□ 1.18
PDE1AP54750 GCSHP2-201ENST00000560971 527 ntBASIC22.45■■□□□ 1.18
PDE1AP54750 AC009065.1-201ENST00000564055 1225 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms