Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.25■□□□□ 0.83
ATN1P54259 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.25■□□□□ 0.83
ATN1P54259 OR7E14P-202ENST00000530490 1290 ntBASIC20.25■□□□□ 0.83
ATN1P54259 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.25■□□□□ 0.83
ATN1P54259 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATN1P54259 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATN1P54259 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.25■□□□□ 0.83
ATN1P54259 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATN1P54259 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATN1P54259 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.25■□□□□ 0.83
ATN1P54259 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATN1P54259 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATN1P54259 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.25■□□□□ 0.83
ATN1P54259 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.24■□□□□ 0.83
ATN1P54259 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATN1P54259 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.24■□□□□ 0.83
ATN1P54259 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.24■□□□□ 0.83
ATN1P54259 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
ATN1P54259 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.24■□□□□ 0.83
ATN1P54259 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATN1P54259 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
ATN1P54259 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.23■□□□□ 0.83
ATN1P54259 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.23■□□□□ 0.83
ATN1P54259 DNAJB3-201ENST00000446806 729 ntBASIC20.23■□□□□ 0.83
ATN1P54259 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.23■□□□□ 0.83
ATN1P54259 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.23■□□□□ 0.83
ATN1P54259 AP005117.1-201ENST00000584346 1413 ntBASIC20.23■□□□□ 0.83
ATN1P54259 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATN1P54259 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.23■□□□□ 0.83
ATN1P54259 AC068587.9-201ENST00000641814 219 ntBASIC20.23■□□□□ 0.83
ATN1P54259 INTS4P1-201ENST00000438455 1935 ntBASIC20.23■□□□□ 0.83
ATN1P54259 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.23■□□□□ 0.83
ATN1P54259 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ATN1P54259 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.23■□□□□ 0.83
ATN1P54259 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATN1P54259 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.23■□□□□ 0.83
ATN1P54259 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATN1P54259 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATN1P54259 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.22■□□□□ 0.83
ATN1P54259 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATN1P54259 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 AC068472.1-201ENST00000474589 881 ntBASIC20.22■□□□□ 0.83
ATN1P54259 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ATN1P54259 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.22■□□□□ 0.83
ATN1P54259 AC040169.1-201ENST00000565382 521 ntBASIC20.22■□□□□ 0.83
ATN1P54259 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATN1P54259 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATN1P54259 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATN1P54259 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.21■□□□□ 0.83
ATN1P54259 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.21■□□□□ 0.83
ATN1P54259 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.21■□□□□ 0.83
ATN1P54259 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.21■□□□□ 0.83
ATN1P54259 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.21■□□□□ 0.83
ATN1P54259 AC007967.2-201ENST00000432613 625 ntBASIC20.21■□□□□ 0.83
ATN1P54259 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.21■□□□□ 0.83
ATN1P54259 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.21■□□□□ 0.83
ATN1P54259 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.21■□□□□ 0.83
ATN1P54259 AC009533.2-201ENST00000543664 586 ntBASIC20.21■□□□□ 0.83
ATN1P54259 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC20.21■□□□□ 0.83
ATN1P54259 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
ATN1P54259 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.21■□□□□ 0.83
ATN1P54259 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.21■□□□□ 0.83
ATN1P54259 AC005786.4-201ENST00000623369 682 ntBASIC20.21■□□□□ 0.83
ATN1P54259 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATN1P54259 AL163051.1-201ENST00000569214 1512 ntBASIC20.21■□□□□ 0.83
ATN1P54259 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms