Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGA2P52926 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGA2P52926 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 AL355802.2-201ENST00000402069 882 ntBASIC16.82■□□□□ 0.28
HMGA2P52926 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.82■□□□□ 0.28
HMGA2P52926 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
HMGA2P52926 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 AC108860.2-201ENST00000562760 2183 ntBASIC16.82■□□□□ 0.28
HMGA2P52926 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HMGA2P52926 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGA2P52926 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGA2P52926 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGA2P52926 AC093010.1-201ENST00000473625 1624 ntBASIC16.81■□□□□ 0.28
HMGA2P52926 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 FSCN1P1-201ENST00000568912 1481 ntBASIC16.81■□□□□ 0.28
HMGA2P52926 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 AC096733.2-201ENST00000609937 1394 ntBASIC16.81■□□□□ 0.28
HMGA2P52926 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 ESRRAP1-201ENST00000400596 1257 ntBASIC16.81■□□□□ 0.28
HMGA2P52926 MESTP1-201ENST00000404287 994 ntBASIC16.81■□□□□ 0.28
HMGA2P52926 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HMGA2P52926 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 AF186192.3-201ENST00000583427 947 ntBASIC16.81■□□□□ 0.28
HMGA2P52926 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGA2P52926 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA2P52926 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA2P52926 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGA2P52926 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HMGA2P52926 MIR149-201ENST00000384879 89 ntBASIC16.8■□□□□ 0.28
HMGA2P52926 MIR935-201ENST00000401179 91 ntBASIC16.8■□□□□ 0.28
HMGA2P52926 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.8■□□□□ 0.28
HMGA2P52926 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA2P52926 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA2P52926 AC009102.3-201ENST00000623118 1491 ntBASIC16.8■□□□□ 0.28
HMGA2P52926 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HMGA2P52926 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMGA2P52926 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGA2P52926 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms