Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.86■□□□□ 0.45
HNF4AP41235 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.86■□□□□ 0.45
HNF4AP41235 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HNF4AP41235 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.86■□□□□ 0.45
HNF4AP41235 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.86■□□□□ 0.45
HNF4AP41235 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HNF4AP41235 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HNF4AP41235 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HNF4AP41235 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 KRT18P22-201ENST00000402024 1347 ntBASIC17.86■□□□□ 0.45
HNF4AP41235 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.86■□□□□ 0.45
HNF4AP41235 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HNF4AP41235 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.86■□□□□ 0.45
HNF4AP41235 AL354751.1-201ENST00000412768 1863 ntBASIC17.86■□□□□ 0.45
HNF4AP41235 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.86■□□□□ 0.45
HNF4AP41235 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HNF4AP41235 AL390961.4-201ENST00000623958 2535 ntBASIC17.86■□□□□ 0.45
HNF4AP41235 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.85■□□□□ 0.45
HNF4AP41235 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.85■□□□□ 0.45
HNF4AP41235 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.85■□□□□ 0.45
HNF4AP41235 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HNF4AP41235 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HNF4AP41235 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HNF4AP41235 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.85■□□□□ 0.45
HNF4AP41235 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.85■□□□□ 0.45
HNF4AP41235 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.85■□□□□ 0.45
HNF4AP41235 KRT8P50-201ENST00000562022 1438 ntBASIC17.85■□□□□ 0.45
HNF4AP41235 HOXB1-202ENST00000577092 1414 ntBASIC17.85■□□□□ 0.45
HNF4AP41235 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.85■□□□□ 0.45
HNF4AP41235 FAM87A-204ENST00000613235 858 ntBASIC17.85■□□□□ 0.45
HNF4AP41235 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HNF4AP41235 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HNF4AP41235 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.84■□□□□ 0.45
HNF4AP41235 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
HNF4AP41235 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.84■□□□□ 0.45
HNF4AP41235 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 ECEL1P3-201ENST00000427961 737 ntBASIC17.84■□□□□ 0.45
HNF4AP41235 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.84■□□□□ 0.45
HNF4AP41235 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.84■□□□□ 0.45
HNF4AP41235 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.84■□□□□ 0.45
HNF4AP41235 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
HNF4AP41235 AC145285.6-201ENST00000604632 637 ntBASIC17.84■□□□□ 0.45
HNF4AP41235 CR769767.2-201ENST00000622735 460 ntBASIC17.84■□□□□ 0.45
HNF4AP41235 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.84■□□□□ 0.45
HNF4AP41235 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HNF4AP41235 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.84■□□□□ 0.45
HNF4AP41235 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.84■□□□□ 0.45
HNF4AP41235 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HNF4AP41235 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms