Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN6P29350 AC097488.1-201ENST00000507834 756 ntBASIC17.49■□□□□ 0.39
PTPN6P29350 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTPN6P29350 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN6P29350 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 SLC25A1P4-201ENST00000567977 778 ntBASIC17.48■□□□□ 0.39
PTPN6P29350 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 AC133561.5-201ENST00000635547 218 ntBASIC17.48■□□□□ 0.39
PTPN6P29350 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
PTPN6P29350 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 REXO1L9P-201ENST00000604264 2108 ntBASIC17.48■□□□□ 0.39
PTPN6P29350 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN6P29350 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN6P29350 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN6P29350 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PTPN6P29350 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN6P29350 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 MIR564-202ENST00000385049 94 ntBASIC17.47■□□□□ 0.39
PTPN6P29350 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 AL023284.2-201ENST00000405850 579 ntBASIC17.47■□□□□ 0.39
PTPN6P29350 CRYGFP-201ENST00000418459 633 ntBASIC17.47■□□□□ 0.39
PTPN6P29350 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN6P29350 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN6P29350 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN6P29350 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN6P29350 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN6P29350 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PTPN6P29350 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTPN6P29350 AC096733.2-201ENST00000609937 1394 ntBASIC17.47■□□□□ 0.39
PTPN6P29350 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTPN6P29350 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN6P29350 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 AC134043.2-201ENST00000624206 2238 ntBASIC17.46■□□□□ 0.39
PTPN6P29350 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 ECEL1P3-201ENST00000427961 737 ntBASIC17.46■□□□□ 0.39
PTPN6P29350 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN6P29350 LINC01023-201ENST00000606054 436 ntBASIC17.46■□□□□ 0.39
PTPN6P29350 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN6P29350 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PTPN6P29350 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PTPN6P29350 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN6P29350 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN6P29350 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN6P29350 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms